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EMPIRICAL ESTIMATES OF BONFERRONI CORRECTIONS FOR USE IN CHROMOSOME MAPPING STUDIES WITH THE BXD RECOMBINANT INBRED STRAINS
Author(s): BELKNAP JK
Source: BEHAVIOR GENETICS    Volume: 22    Issue: 6    Pages: 677-684    Published: NOV 1992  
Times Cited: 47     References: 18     
Abstract: Most chromosome mapping efforts with the BXD recombinant inbred (RI) strains involve comparisons between a trait of interest and each of a large number of marker loci for evidence of linkage. Such multiple tests or comparisons greatly increase the Type I error rate compared to the single-test situation. Perhaps the most direct way to obtain multiple-test error rates is to employ a Bonferroni correction, where the single-test alpha is multiplied by the number of independent (nonredundant) comparisons (k) to yield a multiple-test alpha that protects against even one fortuitous association with any of the markers. Several empirical estimates of k are discussed for the published BXD marker set of 142 mapped loci and the newer unpublished marker set (October 1991) comprised of 352 marker loci. Reasonable estimates of k appear to be roughly 40 and 65 for these two marker sets, respectively.
Document Type: Article
Language: English
Reprint Address: BELKNAP, JK (reprint author), OREGON HLTH SCI UNIV, RES SERV 151W, VA MED CTR, PORTLAND, OR 97201 USA
Addresses:
1. OREGON HLTH SCI UNIV, DEPT MED PSYCHOL, PORTLAND, OR 97201 USA
Publisher: PLENUM PUBL CORP, 233 SPRING ST, NEW YORK, NY 10013
Subject Category: Behavioral Sciences; Genetics & Heredity; Psychology, Multidisciplinary
IDS Number: KK294
ISSN: 0001-8244
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